R FiBiCo script for: Targeting bioactive compounds in natural extracts - Development of a comprehensive workflow combining chemical and biological data
| Main Author: | Roullier, Catherine |
|---|---|
| Other Authors: | ORY, lucie |
| Format: | Dataset |
| Terbitan: |
Mendeley
, 2020
|
| Subjects: | |
| Online Access: |
https:/data.mendeley.com/datasets/9bnss55xpp |
Daftar Isi:
- R FiBiCo script related to the publication : "Targeting bioactive compounds in natural extracts - Development of a comprehensive workflow combining chemical and biological data" This bioinformatics script (encoded with R Studio software) is based on the combination of four statistical models (Spearman, F-PCA, PLS, PLS-DA). After uploading a data matrix containing peak area information and associated bioactivity data (originating from a bioactive extract), it allows to generate of a “Super list” of potential bioactive compounds together with a predictive score. After defining the parameters in the first step corresponding to your own data (filepath, number of groups, colours, ..etc), select all lines (CTRL+A or CMD+A) and run all lines (CTRL+Enter).