Denaturing and dNTPs reagents improve SARS-CoV-2 detection via single and multiplex RT-qPCR
| Main Authors: | Cristian E. Cadena-Caballero, Lina M. Vera-Cala, Carlos Barrios-Hernandez, Diego Rueda-Plata, Lizeth J. Forero-Buitrago, Carolina S. Torres-Jimenez, Erika Lizarazo-Gutierrez, Mayra Agudelo-Rodriguez, Francisco Martinez-Perez |
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| Format: | info dataset Journal |
| Bahasa: | eng |
| Terbitan: |
, 2022
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| Subjects: | |
| Online Access: |
https://zenodo.org/record/6337537 |
Daftar Isi:
- The datas correspond to article entitled: "Denaturing and dNTPs reagents improve SARS-CoV-2 detection via single and multiplex RT-qPCR". The file entitle GISAID have the fasta formats for 107259 genomes from the SARS-CoV-2 GISAID database from January to December 2020. Three documents in plane tex correspond: sequences.fasta contain the original data. sequences_clean.fasta. Corresponds to genomes sequences without nucleotides undeterminateds indicates with "N" in previous document. alignment_clean.fasta. Contain the genomes sequences cleaned alingment. The file entitle GenBank have the data set from 19317 genomes from the SARS-CoV-2 GenBank database from January to October 2020 and the documets have the prrevious order.
- These data are also associated with the national project entitled: "Contribution to the diagnostic protocol of the Coronavirus SARS-CoV-2 and the Influenza A H1N1 Virus by real-time RT-PCR in one step authorized by the World Health Organization with the inclusion of marker genes required for viral infection and their validation by next-generation genomic sequencing with nucleotide concentration technology" financed by the Vice-Rectory of Research and Extension of Industrial University of Santander [project No. 76900] and the Ministry of Science, Technology and Innovation (MinCiencias) of Colombia [No. 1015-2020 - Mincinciaton].