CDKL5_Data_Analysis_Validation-TMT
| Main Authors: | Taran Khanam, Ivan Muñoz, Florian Weiland, Thomas Carroll, Barbara N Borsos, Meghan Slean, Miroslav Novak, Rachel Toth, Paul Appleton, Tibor Pankotai, Houjiang Zhou, John Rouse |
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| Format: | info publication-preprint Journal |
| Terbitan: |
, 2020
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| Subjects: | |
| Online Access: |
https://zenodo.org/record/4311494 |
Daftar Isi:
- Data analysis scripts for MaxQuant search data - Validation-TMT, follow instructions as described in Script File S5 In brief: 1. Place Script files into root 2. Extract zip files into their respective folder (detailed in Script Files S5) 3. Install necessary R libraries (detailed in Script File S5), version numbers is detailed in "Text_File_S2_Session_Info_Validation_TMT.txt" 4. Run Script File S5 Mass spectrometry raw data with the ProteomeXchange accession number PXD022975 can be downloaded from PRIDE Project Webpage: http://www.ebi.ac.uk/pride/archive/projects/PXD022975 FTP Download: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2020/12/PXD022975 The manuscript is available on bioRxiv: https://doi.org/10.1101/2020.12.10.419747 Other files relevant to the manuscript are available from https://doi.org/10.5281/zenodo.4311475