Kraken 2.0.8 beta taxonomic binning of the CAMI 2 Mouse Gut Toy data set, gold standard pooled assembly
| Main Author: | Meyer, Fernando |
|---|---|
| Format: | info dataset Journal |
| Terbitan: |
, 2020
|
| Subjects: | |
| Online Access: |
https://zenodo.org/record/3629600 |
Daftar Isi:
- Taxonomic binning of the gold standard pooled assembly Software: Kraken SoftwareVersion: 2.0.8 beta DataURL: https://data.cami-challenge.org/participate SoftwareURL: https://ccb.jhu.edu/software/kraken2/ ReferenceDatabase: built 2019-05-22 Taxonomy: NCBI 2019-05-22 ShortReadsUsed: False LongReadsUsed: False CommandUsed: kraken2-build --standard --db kraken2db_std --use-ftp kraken2 --db kraken2db_std --threads 16 --output 19122017_mousegut_scaffolds.kraken --report 19122017_mousegut_scaffolds.kreport anonymous_gsa_pooled.fasta cat 19122017_mousegut_scaffolds | awk '{print $2 "\t" $3}' > 19122017_mousegut_scaffolds.cami