Data from "Corset: enabling differential gene expression analysis for de novo assembled transcriptomes"
| Main Authors: | Davidson, Nadia, Oshlack, Alicia |
|---|---|
| Format: | info dataset Journal |
| Terbitan: |
, 2014
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| Subjects: | |
| Online Access: |
https://zenodo.org/record/11134 |
Daftar Isi:
- This dataset contains de novo transcriptome assemblies for three publicly available RNA-seq dataset (SRA055442, SRR453566-SRR453571 and GSE37704 ). For each assembly we also provide a table with the read counts per contig, the output from corset (clusters and counts), and the results from a genome-based analysis. This dataset was used to assess the performance of the corset software. More detail is provided in the paper: Nadia M Davidson and Alicia Oshlack, Corset: enabling differential gene expression analysis for de novo assembled transcriptomes, Genome Biology 2014, 15:410. http://genomebiology.com/2014/15/7/410/abstract